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SRX2564613: GSM2492290: 293FT WT-3; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina HiSeq 3000) run: 30.5M spots, 1.5G bases, 511.1Mb downloads

Submitted by: NCBI (GEO)
Study: RNA-seq of HDAC2-disrupted 293FT cells by CRISPR-Cas9
show Abstracthide Abstract
The transcriptional functions of HDAC1 and HDAC2 are largely viewed as repressive through their association in corepressor complexes, however, the unique functions and targets of HDAC2 are less well understood. We have utilized HDAC2-null cells to distinguish the role of HDAC2 in human cells and identify uniqye HDAC2 targets. Overall design: HDAC2-null 293FT cells were created via CRISPR-Cas9 targeting and analyzed by RNA-seq for differential expression.
Sample: 293FT WT-3
SAMN06339410 • SRS1981271 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 3000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Total RNA was isolated from cells at 60-70% confluence utilizing the Nucleospin RNA kit (Macherey-Nagel, Ref #740955.5) KAPA mRNA stranded kit (KK8401, Roche Catalog07962169001) for library preparation with poly-A enrichment
Experiment attributes:
GEO Accession: GSM2492290
Links:
Runs: 1 run, 30.5M spots, 1.5G bases, 511.1Mb
Run# of Spots# of BasesSizePublished
SRR525987630,489,1561.5G511.1Mb2017-11-15

ID:
3707005

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