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SRX248870: GSM1096590: Mouse A-Myb Mutant 14.5 dpp small RNA; Mus musculus; RNA-Seq
3 ILLUMINA (Illumina HiSeq 2000) runs: 169.9M spots, 8.5G bases, 6.3Gb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: An Ancient Transcription Factor Initiates the Burst of piRNA Production During Early Meiosis in Mouse Testes (smallRNA-Seq)
show Abstracthide Abstract
Animal germ cells produce PIWI-interacting RNAs (piRNAs), small silencing RNAs that suppress transposons and enable gamete maturation. Mammalian transposon-silencing piRNAs accumulate early in spermatogenesis, whereas pachytene piRNAs are produced later during post-natal spermatogenesis and account for >95% of all piRNAs in the adult mouse testis. Mutants defective for pachytene piRNA pathway proteins fail to produce mature sperm, but neither the piRNA precursor transcripts nor the trigger for pachytene piRNA production is known. Here, we show that the transcription factor A-MYB initiates pachytene piRNA production. A-MYB drives transcription of both pachytene piRNA precursor RNAs and the mRNAs for core piRNA biogenesis factors, including MIWI, the protein through which pachytene piRNAs function. A-MYB regulation of piRNA pathway proteins and piRNA genes creates a coherent feed-forward loop that ensures the robust accumulation of pachytene piRNAs. This regulatory circuit, which can be detected in rooster testes, likely predates the divergence of birds and mammals. Overall design: smallRNA-Seq in mouse and rooster testes
Sample: Mouse A-Myb Mutant 14.5 dpp small RNA
SAMN01975536 • SRS400981 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: size fractionation
Layout: SINGLE
Experiment attributes:
GEO Accession: GSM1096590
Links:
External link:
Runs: 3 runs, 169.9M spots, 8.5G bases, 6.3Gb
Run# of Spots# of BasesSizePublished
SRR772037102,581,7365.1G3.4Gb2013-03-28
SRR77203833,601,5881.7G1.5Gb2015-07-22
SRR77203933,693,6551.7G1.5Gb2015-07-22

ID:
343151

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