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SRX2095158: GSM2300784: yw embr AB+ 2; Drosophila melanogaster; ChIP-Seq
1 ILLUMINA (Illumina MiSeq) run: 1.7M spots, 255.8M bases, 96.1Mb downloads

Submitted by: NCBI (GEO)
Study: Functional dissection of Drosophila melanogasterSUUR protein influence on H3K27me3 profile
show Abstracthide Abstract
In eukaryotes, heterochromatin replicates late in S phase of the cell cycle and contains specific covalent modifications of histones. SuURmutation found in Drosophila makes heterochromatin replicate earlier than in wild type and reduces the level of repressive histone modifications. SUUR protein was shown to be associated with moving replication forks, apparently through the interaction with PCNA. The biological process underlying the effects of SUUR on replication and composition of heterochromatin remains unknown. Overall design: Examination of H3K27me3 histone modification in Drosophila embryos in presence or absence of SuUR mutation.
Sample: yw embr AB+ 2
SAMN05725332 • SRS1664205 • All experiments • All runs
Library:
Instrument: Illumina MiSeq
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: PAIRED
Construction protocol: 20 ul of 0-4h embryos were used as starting material. Abcam anti-H3K27me3 antibodies (6002) were used for chromatin immunoprecipitation. Chromatin was sheared using BioRuptor instrument (Diagenode). DNA from precipitated material and input were used for library preparation using Illumina Nextera protocol.
Experiment attributes:
GEO Accession: GSM2300784
Links:
Runs: 1 run, 1.7M spots, 255.8M bases, 96.1Mb
Run# of Spots# of BasesSizePublished
SRR41152221,683,074255.8M96.1Mb2019-10-24

ID:
3089930

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