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SRX20869897: GSM7531152: COR-1726-D2 #2; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 29.6M spots, 8.9G bases, 2.7Gb downloads

External Id: GSM7531152_r1
Submitted by: Biotechnology Building rm 333, Biomedical Sciences, Cornell University
Study: Transcriptome profiling of plasma-derived particles containing platelets in ME/CFS post exercise challenge
show Abstracthide Abstract
We profiled gene expression of pelleted material containing platelets from frozen plasma of healthy controls and ME/CFS cases for bulk RNA-seq, collected before and 24h after participants conducted a cardiopulmonary exercise test (CPET). Overall design: Plasma samples collected from 3 ME/CFS cases and 3 healthy controls (all females) at 2 timepoints were included in the study.
Sample: COR-1726-D2 #2
SAMN36275338 • SRS18149959 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: GSM7531152
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA was isolated using the Trizol protocol, with an extra chloroform extraction to remove residual phenol and addition of glyco-blue as a carrier to promote RNA precipitation. RNA concentration was determined with a HS RNA Qubit assay (ThermoFisher) and integrity assessed on a Fragment Analyzer (Agilent). Directional RNA-seq libraries were prepared from 40ng total RNA using the NEBNext Directional Ultra II RNA Library Prep Kit for Illumina (New England Biolabs), with initial polyA+ isolation.
Runs: 1 run, 29.6M spots, 8.9G bases, 2.7Gb
Run# of Spots# of BasesSizePublished
SRR2511775829,602,8408.9G2.7Gb2024-01-16

ID:
28302220

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