GSM7009637: patient P077, uninfected_in_vitro, ltbi_group; Homo sapie... - SRA

SRX19212348: GSM7009637: patient P077, uninfected_in_vitro, ltbi_group; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina HiSeq 3000) run: 79.2M spots, 8G bases, 2.3Gb downloads

External Id: GSM7009637_r1

Submitted by: Division of Pulmonary, Critical Care and Sleep Medicine, Case Western Reserve University and the Louis Stokes Cleveland VA Medical Center

Study: Distinct gene expression signatures comparing latent tuberculosis infection with different routes of Bacillus Calmette-Guérin vaccination

PRJNA929281 • SRP419959 • All experiments • All runs

show Abstracthide Abstract

RNA-Seq was utilized to provide an unbiased assessment of systemic and mucosal immunity using blood cells from LTBI subjects and recipients of ID and oral (PO) BCG. Overall design: BAL cell gene expression was evaluated after overnight culture in medium alone (baseline conditions), or with virulent Mtb strain H37Rv in patients with latent tuberculosis infection (LTBI) and in BCG-vaccinated (ID and PO groups) and Mtb/BCG-naive patients.

Sample: patient P077, uninfected_in_vitro, ltbi_group

SAMN32955024 • SRS16619648 • All experiments • All runs

Organism: Homo sapiens

Library:

Name: GSM7009637

Instrument: Illumina HiSeq 3000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: Cell pellets were flash-frozen and stored at -80 for eventual RNA extraction. RiboZero v1

Runs: 1 run, 79.2M spots, 8G bases, 2.3Gb

Run	# of Spots	# of Bases	Size	Published
SRR23268444	79,217,767	8G	2.3Gb	2024-11-08

ID:: 26415041

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