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SRX1791121: GSM2174458: 1Snf5Snf2IP (ChIP-Seq); Saccharomyces cerevisiae; ChIP-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 15.3M spots, 782.8M bases, 495.5Mb downloads

Submitted by: NCBI (GEO)
Study: Composition and Function of Mutant Swi/Snf Complexes
show Abstracthide Abstract
Loss of Swi/Snf subunits regulate transcription. Overall design: RNA-seq and ChIP-seq for Snf2 was done in Swi/Snf subunit deletion mutant yeast strains
Sample: 1Snf5Snf2IP (ChIP-Seq)
SAMN05162313 • SRS1461365 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2500
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Construction protocol: Yeast whole cell extract were sonicated DNA-protein complexes were isolated with Snf2-C'antibody (kind gift from Joseph Reese Pennsylvania State University: antibody raised in Reese lab) . ChiP-seq, Mnase-seq, RNA-seq libraries were prepared using KAPA High Throughput Library Preparation Kit, Roche.
Experiment attributes:
GEO Accession: GSM2174458
Links:
Runs: 1 run, 15.3M spots, 782.8M bases, 495.5Mb
Run# of Spots# of BasesSizePublished
SRR356799615,349,359782.8M495.5Mb2017-02-17

ID:
2563537

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