GSM2147641: 16T-shLuc_1 [RNA-seq]; Mus musculus; RNA-Seq - SRA

SRX1753579: GSM2147641: 16T-shLuc_1 [RNA-seq]; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 22.4M spots, 4.5G bases, 2.8Gb downloads

Submitted by: NCBI (GEO)

Study: Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility [RNA-seq]

PRJNA321071 • SRP074735 • All experiments • All runs

show Abstracthide Abstract

We describe Nfib as an important regulator of chromatin accessibility in SCLC. Overall design: We performed RNA-seq on three cell lines with either knockdown of Nfib expression or overexpression of Nfib. Cell lines 16T and KP1 were expressing iether a control vector or a vector expressing shRNA to Nfib, in duplicate Cell line KP22 were expressing either an empty vector or a vector expressing Nfib cDNA, in duplicate.

Sample: 16T-shLuc_1 [RNA-seq]

SAMN04965907 • SRS1430452 • All experiments • All runs

Organism: Mus musculus

Library:

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: Qiagen RNAeasy mini kit Illumina TruSeq v2 kit

Experiment attributes:

GEO Accession: GSM2147641

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 22.4M spots, 4.5G bases, 2.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR3493682	22,372,109	4.5G	2.8Gb	2016-05-12

ID:: 2512589

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