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SRX1606652: GSM2076707: TSC_Ctrl_2; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 12.8M spots, 2.6G bases, 1.4Gb downloads

Submitted by: NCBI (GEO)
Study: Trophoblast stem cells (TSC) global transcriptome in stemness conditions after treatment with Lsd1 inhibitor or induction of Lsd1 depletion [RNA-seq]
show Abstracthide Abstract
RNA-Seq for Lsd1-deficient TSCs or treated with Lsd1 inhibitor for 24hrs Overall design: TSC were treated with Lsd1 inhibitor or DMSO in stemness conditions for 24hrs; media and inhibitor where replaced every 12hrs along the duration of the experiment; 2 replicates were used for treatment together with 2 control replicates in stemness; DFKZ genomics and proteomics. Please note that strain and targeting strategy had been described in the previous PMID: 24448552 publication
Sample: TSC_Ctrl_2
SAMN04525180 • SRS1316232 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: RNA was harvested using Qiagen kit. Strand-Specific RNA Seq with Agilent kit RNA libraries were prepared for sequencing using standard Illumina protocols
Experiment attributes:
GEO Accession: GSM2076707
Links:
Runs: 1 run, 12.8M spots, 2.6G bases, 1.4Gb
Run# of Spots# of BasesSizePublished
SRR319637412,763,1762.6G1.4Gb2017-06-12

ID:
2297458

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