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SRX156360: GSM953080: Histone H4 ChIP-seq; Bos taurus; ChIP-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 24.5M spots, 981.5M bases, 556.6Mb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: ChIP-seq of bovine cells (MDBK) to study butyrate-induced histone modification
show Abstracthide Abstract
Utilizing next-generation sequencing technology, combined with ChIP (Chromatin Immunoprecipitation) technology to analyze histone modification (acetylation) induced by butyrate and to map the epigenomic landscape of normal histone H3, H4 Overall design: Cells were treated with 10 mM butyrate for 24 hr, The cells were scraped from the flask and homogenized with ice-cold Dounce homogenizer to release the nuclei. The collected nuclei were resuspended in digestion buffer and enzymatic shearing was performed. ChIP with anti H3, H4 and acetyl-H3 and acetyl-H4.
Sample: Histone H4 ChIP-seq
SAMN01081732 • SRS347248 • All experiments • All runs
Organism: Bos taurus
Library:
Name: GSM953080: Histone H4 ChIP-seq
Instrument: Illumina HiSeq 2000
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Spot descriptor:
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Experiment attributes:
GEO Accession: GSM953080
Links:
External link:
Runs: 1 run, 24.5M spots, 981.5M bases, 556.6Mb
Run# of Spots# of BasesSizePublished
SRR51644424,536,461981.5M556.6Mb2014-01-24

ID:
197646

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