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SRX144685: GSM923259: NRC 42T2Y_s5_TCGTTG; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 507,777 spots, 25.4M bases, 16Mb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Genome-wide microRNA expression analysis of clear cell Renal Cell Carcinoma by next generation deep sequencing
show Abstracthide Abstract
MicroRNAs (miRNAs), non-coding RNAs regulating gene expression, are frequently aberrantly expressed in human cancers. Next-generation deep sequencing technology enables genome-wide expression profiling of known miRNAs and discovery of novel miRNAs at unprecedented quantitative and qualitative accuracy. Deep sequencing was performed on 22 fresh frozen clear cell renal cell carcinoma (ccRCC), 11 non-tumoral renal cortex (NRC) samples and 2 ccRCC cell lines (n=35). The 22 ccRCCs patients belonged to 3 prognostic sub-groups, i.e. Those without disease recurrence, with recurrence and with metastatic disease at diagnosis Overall design: Deep sequencing was performed on 22 fresh frozen clear cell renal cell carcinoma (ccRCC), 11 non-tumoral renal cortex (NRC) samples and 2 ccRCC cell lines (n=35). The 22 ccRCCs patients belonged to 3 prognostic sub-groups, i.e. Those without disease recurrence, with recurrence and with metastatic disease at diagnosis.
Sample: NRC 42T2Y_s5_TCGTTG
SAMN00989354 • SRS311228 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: GSM923259: NRC 42T2Y_s5_TCGTTG
Instrument: Illumina Genome Analyzer IIx
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: size fractionation
Layout: SINGLE
Spot descriptor:
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Experiment attributes:
GEO Accession: GSM923259
Links:
External link:
Runs: 1 run, 507,777 spots, 25.4M bases, 16Mb
Run# of Spots# of BasesSizePublished
SRR491345507,77725.4M16Mb2012-06-21

ID:
175169

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