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SRX14114540: GSM5883896: KO 0-2 Liver; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina NovaSeq 6000) run: 28.4M spots, 5.7G bases, 1.6Gb downloads

External Id: GSM5883896_r1
Submitted by: Pierre Baldi, Computer Science, University of California, Irvine
Study: The central clock suffices to drive the majority of circulatory metabolic rhythms
show Abstracthide Abstract
This dataset was generated to investigate the independence of the central clock in regulating hepatic transcriptional rhythms. Overall design: The core clock gene Bmal1 was knocked out using a floxed STOP codon (KO mice). By crossing these mice with Syt10-Cre mice we were able to rescue the Bmal1 expression in the suprachiasmatic nucleus (RE mice). These mice were compared with mice expressing Bmal1 in all tissues (WT). Livers were collected at 6 time points over the circadian 24-hour period.
Sample: KO 0-2 Liver
SAMN25812754 • SRS11936312 • All experiments • All runs
Organism: Mus musculus
Library:
Name: GSM5883896
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Standard Illumina RNA-seq protocol
Runs: 1 run, 28.4M spots, 5.7G bases, 1.6Gb
Run# of Spots# of BasesSizePublished
SRR1795787528,406,5245.7G1.6Gb2022-07-05

ID:
19888485

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