U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX13138321: GSM5690278: IL-15Tg WT 3; Mus musculus; RNA-Seq
2 ILLUMINA (Illumina HiSeq 2500) runs: 108.3M spots, 10.9G bases, 3.5Gb downloads

Submitted by: NCBI (GEO)
Study: Xbp1s controls IL-15-mediated natural killer cell survival and function by regulating Pim2 and Tbet
show Abstracthide Abstract
We previously reported that X-Box Binding Protein 1 (Xbp1s), an essential transcriptional factor downstream of IL-15 and Akt signaling, controls cell survival and effector function in human natural killer (NK) cells. However, the mechanisms by which Xbp1s regulates NK cell survival and function remains unknown. In this study, by using Xbp1s conditional knock-out (KO) mice, we found that Xbp1s is critical for IL-15-mediated NK cell survival but not proliferation in vitro and in vivo. Mechanically, Xbp1s regulates homeostatic NK cell survival through targeting Pim2, a critical anti-apoptotic gene. Pim2 in turn stabilizes Xbp1s protein through phosphorylation at Thr58. Xbp1s enhances NK cell effector function and anti-tumor immunity via recruitment of Tbet to the promoter region of Ifng. Collectively, our findings reveal an important role of IL-15–Xbp1s signaling in NK cell survival and effector function. Overall design: Total RNA was isolated from purified splenic NK cells from IL-15Tg-WT and IL-15Tg-Xbp1s cKO mice using a RNeasy Mini Kit (QIAGEN). The RNA libraries were generated using the KAPA Hyper Prep Kit (KAPA Biosystems). Sequencing was performed on the HiSeq2500.
Sample: IL-15Tg WT 3
SAMN23139441 • SRS11071518 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Total RNA was isolated from purified splenic NK cells from IL-15Tg-WT and IL-15Tg-Xbp1s cKO mice using a RNeasy Mini Kit (QIAGEN). The RNA libraries were generated using the KAPA Hyper Prep Kit (KAPA Biosystems). Sequencing was performed on the HiSeq2500. Sequencing was performed at the City of Hope Genomics Facility on an Illumina HiSeq2500 machine with single read 50 bp mode.
Experiment attributes:
GEO Accession: GSM5690278
Links:
Runs: 2 runs, 108.3M spots, 10.9G bases, 3.5Gb
Run# of Spots# of BasesSizePublished
SRR1694638254,132,2985.5G1.7Gb2023-01-01
SRR1694638354,132,2985.5G1.8Gb2023-01-01

ID:
17927097

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...