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SRX12405077: GSM5603733: H1; Homo sapiens; RNA-Seq
1 ILLUMINA (HiSeq X Ten) run: 31.9M spots, 9.6G bases, 3.8Gb downloads

Submitted by: NCBI (GEO)
Study: Human Pluripotent Stem Cell-derived Islets Ameliorate Diabetes in Nonhuman Primates [human_bulk]
show Abstracthide Abstract
Human pluripotent stem cell-derived islets (hPSC-islets) are a promising cell resource for diabetes treatment. Here, we demonstrate that transplantation of human pluripotent stem cell-derived islets into diabetic nonhuman primates effectively restored endogenous insulin secretion and improved glycemic control. Single-cell RNA sequencing analysis of S6D2 clusters confirmed the existence of the three major pancreatic endocrine cell populations (ß cells, a-like cells and d-like cells) and their proportions, which altogether accounted for 80%. Importantly, hierarchical clustering of S6D2 hCiPSC-islets, 10 wpt kidney grafts and primary human islets showed that the hCiPSC differentiated pancreatic endocrine cells shared similar global gene expression profiles to their native counterparts in primary human islets. Single-cell RNA sequencing analysis on PBMCs revealed the potential immune response of recipient macaque to hCiPSC-islets. Overall design: Bulk RNA sequencing analysis on hADFs, hCiPSCs, hiPSCs and hESCs to compare the global gene expression profiles.
Sample: H1
SAMN21903810 • SRS10374260 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: HiSeq X Ten
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Cells were harvested and resuspended in PBS with 0.04% BSA at 1×10^6 cells per milliliter. Cells were lysed and the released RNA for the construction of sequencing libraries. Sequencing libraries were prepared using Illumina protocols Bulk RNA sequencing
Experiment attributes:
GEO Accession: GSM5603733
Links:
Runs: 1 run, 31.9M spots, 9.6G bases, 3.8Gb
Run# of Spots# of BasesSizePublished
SRR1611958631,859,5619.6G3.8Gb2022-02-15

ID:
16798840

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