U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX12067751: GSM5563781: WTNA2; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 21.9M spots, 6.6G bases, 1.9Gb downloads

Submitted by: NCBI (GEO)
Study: High-throughput sequencing Analysis of mouse BMDM cell Transcriptomes after tumor supernatants induction
show Abstracthide Abstract
The tumor microenvironment (TME) is a unique niche governed by constant crosstalk within and across all intratumoral cellular compartments. In particular, intratumoral high potassium has shown its immune-suppression potency on T cells. However, as a pan-cancer characteristic related to local necrosis, the impact of this ionic disturbance on innate immunity is still unknown. Here, using both murine and human samples, we reveal that intratumoral high potassium leads to profound suppression of the anti-tumor capacity of tumor-associated macrophages (TAMs). We report the high-throughput profiling of the transcriptomes of murine primary BMDMs after tumor conditioned medium (TCM) stimulation. Overall design: Primary BMDMs from C57B6J mice were treated with B16F10 tumor cells conditioned medium supplemented with/without KCl or NaCl for 6 hours, and the final KCl and NaCl concentration was 40mM.
Sample: WTNA2
SAMN21335669 • SRS10048471 • All experiments • All runs
Organism: Mus musculus
Library:
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Total RNA was extracted with RNA extraction kit following manufacturer's instructions RNA libraries were prepared for sequencing using standard Illumina protocols
Experiment attributes:
GEO Accession: GSM5563781
Links:
Runs: 1 run, 21.9M spots, 6.6G bases, 1.9Gb
Run# of Spots# of BasesSizePublished
SRR1577472921,924,2886.6G1.9Gb2024-09-07

ID:
15987094

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...