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SRX113697: GSM852805: Wild-type-3w replicate 2
1 ILLUMINA (Illumina HiSeq 2000) run: 44.4M spots, 2.6G bases, 1.5Gb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Genome-wide identification of non-coding RNAs targeted by XRN exoribonucleases in collaboration with FRY1 using RNA-Seq in Arabidopsis thaliana.
show Abstracthide Abstract
We report new insight of non-coding RNA degradation mediated by XRN exoribonucleases and FRY1 in Arabidopsis thaliana. We suggest that XRN3, in combination with FRY1, is required to prevent the accumulation of 3’ extensions that arise from thousands of mRNA and miRNA precursor transcripts. Overall design: Examination of genome-wide transcriptomes of Arabidopsis genotypes such as fry1-6, xrn3-3, xrn2-1xrn3-3, xrn2-1xrn4-6 and xrn3-3xrn4-6 using directional RNA-Seq method.
Sample: Wild-type-3w replicate 2
SAMN00769273 • SRS284529 • All experiments • All runs
Library:
Name: GSM852805: Wild-type-3w replicate 2
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: OTHER
Selection: cDNA
Layout: SINGLE
Spot descriptor:
forward

Experiment attributes:
GEO Accession: GSM852805
Links:
External link:
Runs: 1 run, 44.4M spots, 2.6G bases, 1.5Gb
Run# of Spots# of BasesSizePublished
SRR39381144,427,4812.6G1.5Gb2012-05-03

ID:
131237

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