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SRX080306: GSM749444: PEG_Sorghum_Root_1
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 21.5M spots, 1.1G bases, 592.2Mb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: RNA-Seq of Sorghum bicolor 9d seedlings in response to osmotic stress and abscisic acid
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This study utilized next generation sequencing technology (RNA-Seq) to examine the transcriptome of sorghum plants challenged with osmotic stress and exogenous abscisic acid (ABA) to elucidate those genes and gene networks that contribute to sorghum's tolerance to water-limiting environments with a long-term aim of developing strategies to improve plant productivity under drought. Overall design: We examined the mRNA of 9 day old Sorghum bicolor (BTx623) from 2 tissue types (roots and shoots) for 2 treatments (20µM ABA and 20% PEG) with corresponding controls (0.2M NaOH and H2O) for 27 hrs prior to harvesting, each done in triplicate biological replicates -- resulting in 24 unique runs
Sample: PEG_Sorghum_Root_1
SAMN00631324 • SRS213352 • All experiments • All runs
Organism: Sorghum bicolor
Library:
Name: GSM749444: PEG_Sorghum_Root_1
Instrument: Illumina Genome Analyzer IIx
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Spot descriptor:
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Experiment attributes:
GEO Accession: GSM749444
Links:
External link:
Runs: 1 run, 21.5M spots, 1.1G bases, 592.2Mb
Run# of Spots# of BasesSizePublished
SRR29923021,531,2971.1G592.2Mb2011-11-01

ID:
90894

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