454 sequencing of fish metagenome fragment library - SRA

SRX000228: 454 sequencing of fish metagenome fragment library
1 LS454 (454 GS 20) run: 86,161 spots, 9.3M bases, 22.3Mb downloads

Design: none provided

Submitted by: San Diego State University (SDSU)

Study: Microbial community isolated from fish slime layer

PRJNA28395 • SRP000156 • All experiments • All runs

show Abstracthide Abstract

Microbial community was isolated May 4, 2006, from the slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA) (33.537594, -116.097751). The fish were sick at time of sampling. Sequencing was done at 454 Life Sciences. 454 sequence data is available from the Short Read Archive (SRA): <a href="ftp://ftp.ncbi.nih.gov/pub/TraceDB/ShortRead/SRA000437 ">SRA000437</a>. Metagenomics SEED ID: 4440066.3 Nature paper ID: 70 The WGS project can be found using the Project data link.

Sample: Generic sample from fish metagenome

SAMN00000151 • SRS000384 • All experiments • All runs

Organism: fish metagenome

Library:

Name: FishMorSlimKentSTMic050406

Instrument: 454 GS 20

Strategy: OTHER

Source: OTHER

Selection: RANDOM

Layout: SINGLE

Spot descriptor:

5 forward

Runs: 1 run, 86,161 spots, 9.3M bases, 22.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR001068	86,161	9.3M	22.3Mb	2008-04-18

ID:: 229

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