454 sequencing of saltern metagenome fragment library - SRA

SRX000219: 454 sequencing of saltern metagenome fragment library
2 LS454 (454 GS 20) runs: 45,223 spots, 4.9M bases, 12.1Mb downloads

Design: none provided

Submitted by: San Diego State University (SDSU)

Study: Microbial community from low salinity saltern

PRJNA28377 • SRP000147 • All experiments • All runs

show Abstracthide Abstract

Microbial community collected November 10, 2005, from a "low" salinity saltern in San Diego, CA (32.599040, -117.107356). Sequenced at 454 Life Sciences. 454 sequence data is available from the Short Read Archive (SRA): <a href="ftp://ftp.ncbi.nih.gov/pub/TraceDB/ShortRead/SRA000428 ">SRA000428</a>. Metagenomics SEED ID: 4440435.3 Nature paper ID: 4 The WGS project can be found using the Project data link.

Sample: Generic sample from saltern metagenome

SAMN00000142 • SRS000375 • All experiments • All runs

Organism: saltern metagenome

Library:

Name: MedSalternSDbayMic111005

Instrument: 454 GS 20

Strategy: OTHER

Source: OTHER

Selection: RANDOM

Layout: SINGLE

Spot descriptor:

5 forward

Runs: 2 runs, 45,223 spots, 4.9M bases, 12.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR001057	16,850	1.8M	4.5Mb	2008-04-18
SRR001058	28,373	3.1M	7.5Mb	2008-04-18

ID:: 220

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity