454 sequencing of saltern metagenome fragment library - SRA

SRX000217: 454 sequencing of saltern metagenome fragment library
2 LS454 (454 GS 20) runs: 122,056 spots, 13.7M bases, 33.4Mb downloads

Design: none provided

Submitted by: San Diego State University (SDSU)

Study: Viral community from low salinity saltern

PRJNA28373 • SRP000145 • All experiments • All runs

show Abstracthide Abstract

Viral community collected November 10, 2005, from a "low" salinity saltern (32.599040, -117.107356) and sequenced at 454 Life Sciences. 454 sequence data is available from the Short Read Archive (SRA): <a href="ftp://ftp.ncbi.nih.gov/pub/TraceDB/ShortRead/SRA000426 ">SRA000426</a>. Metagenomics SEED ID: 4440432.3 Nature paper ID: 16 The WGS project can be found using the Project data link.

Sample: Generic sample from saltern metagenome

SAMN00000140 • SRS000373 • All experiments • All runs

Organism: saltern metagenome

Library:

Name: lowSalternSDbayVir111005

Instrument: 454 GS 20

Strategy: OTHER

Source: OTHER

Selection: RANDOM

Layout: SINGLE

Spot descriptor:

5 forward

Runs: 2 runs, 122,056 spots, 13.7M bases, 33.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR001053	51,121	5.7M	14.1Mb	2008-04-18
SRR001054	70,935	7.9M	19.3Mb	2008-04-18

ID:: 218

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Sequence Read Archive

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