Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473541: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322361' containing sample 'M2129'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.1M spots, 635.2M bases, 255.1Mb downloads

UUID: 2272333d-b63c-47a5-8963-76af6971f5f8

Design: Illumina sequencing of Mycobacterium tuberculosis M2129 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235767 • SRP038526 • All experiments • All runs

Sample:

SAMN02599101 • SRS559831 • All experiments • All runs

Organism: Mycobacterium tuberculosis M2129

Library:

Name: Pond-322361

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485167.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5J2

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57832

research_project: RP-114

root_sample_id: SM-4P8U1

sample_id: SM-5G5J2

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.1M spots, 635.2M bases, 255.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1173054	1,566,787	316.5M	126.9Mb	2014-02-20
SRR1173426	1,577,734	318.7M	128.2Mb	2014-02-20

ID:: 654031

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