Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX367958: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279347' containing sample 'Staphylococcus aureus M0838'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.6M spots, 939.2M bases, 400Mb downloads

UUID: af62b49a-d442-4033-977d-d6397038e3ed

Design: Illumina sequencing of Staphylococcus aureus M0838 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216786 • SRP031967 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0838

SAMN02325737 • SRS494007 • All experiments • All runs

Organism: Staphylococcus aureus M0838

Library:

Name: Pond-279347

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396230.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWN5

material_type: DNA:DNA Somatic

product_order: PDO-1837

product_part_number: P-WG-0004

project: G45328

research_project: RP-433

root_sample_id: SM-4CXFN

sample_id: SM-4UWN5

work_request: 37670

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-11 17:00:05.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.6M spots, 939.2M bases, 400Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017136	2,323,336	469.3M	199.4Mb	2013-10-25
SRR1017137	2,326,330	469.9M	200.7Mb	2013-10-25

ID:: 526589

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