Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from Nucleotide

SRX507214: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-311246' containing sample 'GD2010-102'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.1M spots, 634.8M bases, 304.5Mb downloads

UUID: 811caee6-fc66-4e9d-9f39-da074deb5091

Design: Illumina sequencing of Staphylococcus aureus GD2010-102 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus GD2010-102

SAMN02391396 • SRS586180 • All experiments • All runs

Organism: Staphylococcus aureus GD2010-102

Library:

Name: Pond-311246

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445659.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571TI

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51735

research_project: RP-513

root_sample_id: SM-4PAKJ

sample_id: SM-571TI

work_request: 39110

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-17 10:49:08.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.1M spots, 634.8M bases, 304.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1212977	3,142,698	634.8M	304.5Mb	2014-04-02

ID:: 706518

SRA

Sequence Read Archive

Result Filters

Send to:

Links from Nucleotide

Supplemental Content

Related information

Recent activity