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SRX008141: Illumina sequencing of Nasonia Longicornis Fragment
14 ILLUMINA (Illumina Genome Analyzer II) runs: 88.2M spots, 4G bases, 1.5Gb downloads

Design: Genomic DNA Sample Preparation
Submitted by: Baylor College of Medicine (BCM)
Study: Genome sequencing of the parasitoid wasp Nasonia longicornis
show Abstracthide Abstract
The <i>Nasonia longicornis</i> genome was sequenced by the Human Genome Sequencing Center at Baylor College of Medicine using a whole genome shotgun (WGS) approach. The genome was sequenced at one-fold coverage using Sanger sequencing, and 12-fold coverage using Illumina short-read sequencing (45-bp reads). The reads were assembled by aligning to the highly related genome of <i>Nasonia vitripennis</i> (AAZX00000000) using the Mosaik assembler, and a consensus sequence was determined, changing any bases below a threshold level of sequence quality to N in the consensus. The assembly covers 62.6% of the <i>N. longicornis</i> genome, and 86.3% of the predicted coding regions.
Sample: Generic sample from Nasonia longicornis
SAMN00003080 • SRS004862 • All experiments • All runs
Library:
Name: IWG.NLON.00_000sA
Instrument: Illumina Genome Analyzer II
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Spot descriptor:
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Runs: 14 runs, 88.2M spots, 4G bases, 1.5Gb
Run# of Spots# of BasesSizePublished
SRR0235517,702,582346.6M131.7Mb2009-09-09
SRR0235527,889,411355M132.9Mb2009-09-09
SRR0235537,628,945343.3M129.1Mb2009-09-09
SRR0235547,182,297323.2M145.3Mb2009-09-09
SRR0235553,413,002153.6M54.8Mb2009-09-09
SRR0235567,636,788343.7M129.8Mb2009-09-09
SRR0235577,390,998332.6M149.3Mb2009-09-09
SRR0235586,363,406286.4M113.2Mb2009-09-09
SRR0235594,640,593208.8M77.6Mb2009-09-09
SRR0235606,500,557292.5M124.9Mb2009-09-09
SRR0235617,073,966318.3M131.2Mb2009-09-09
SRR0235625,476,185246.4M89.4Mb2009-09-09
SRR0235634,618,855207.8M76.5Mb2009-09-09
SRR0235644,638,705208.7M78.3Mb2009-09-09

ID:
8427

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