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SRX877426: Metagenomics of human microbiome
1 ILLUMINA (Illumina HiSeq 2000) run: 3.3M spots, 661.6M bases, 420.7Mb downloads

Design: Illumina sequencing of Human Microbiome Project 16S rRNA 454 Clinical Production Phase II 2893796017 paired end WGS library
Submitted by: The Genome Center at Washington University School of Medicine in St. Louis (WUGSC)
Study: Human Microbiome Project (HMP) Metagenomic WGS Projects, deeper sequencing of the human microbiome samples: Production Phase
show Abstracthide Abstract
The HMP metagenomes production phase represents the shotgun sequencing of metagenomic DNA extracted from samples taken from multiple body sites across hundreds of human subjects. Coupled with the other data generated during the HMP project, these results will provide insights into the genes and pathways present in the human microbiome. We are learning more and more about the ways that human health is influenced by the complex and dynamic communities of microbes (the human microbiota) present on and within our bodies. Disruptions in these communities may trigger or influence the course of various disease states. Preliminary studies have shown this to be the case for certain diseases. The Human Microbiome Project expands on these studies to better understand, prevent and treat many human diseases.
Sample: Human metagenome sample from G_DNA_Stool of a male participant in the dbGaP study "HMP Core Microbiome Sampling Protocol A (HMP-A)"
SAMN00066819 • SRS046810 • All experiments • All runs
Name: 2894010849
Instrument: Illumina HiSeq 2000
Strategy: WGS
Selection: unspecified
Layout: PAIRED
Spot descriptor:
forward101  reverse

Human sequences removed.  (Additional phenotype data...)

The SRA run(s) below have been pre-filtered by NCBI to remove contaminating human sequence. To obtain additional phenotype data, please navigate to dbGaP authorized access system and request access to:

  • Study:  phs000228
  • Consent Group: HMP
Runs: 1 run, 3.3M spots, 661.6M bases, 420.7Mb
Run# of Spots# of BasesSizePublished


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