Nanopore sequencing of activated sludge metagenome - SRA

SRX8234969: Nanopore sequencing of activated sludge metagenome
1 OXFORD_NANOPORE (PromethION) run: 2.8M spots, 22.5G bases, 18.7Gb downloads

Design: Library preparation and sequencing was conducted at Aalborg University, following the Oxford Nanopore 1D Genomic DNA by ligation SQK-LSK109 protocol and run on PromethION R9 FLO-PRO002 flow cells.

Submitted by: Aalborg University

Study: Activated sludge metagenome Genome sequencing and assembly

PRJNA629478 • SRP259711 • All experiments • All runs

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This project encompasses data from the MiDAS genomes project, recovery of >1000 high-quality metagenome-assembled genomes. The project is funded by the Villum Foundation, Denmark. The associated sample metagenomes are from 23 Danish wastewater treatment plants. Both Illumina and Oxford Nanopore data are submitted.

Sample:

SAMN14825705 • SRS6587286 • All experiments • All runs

Organism: activated sludge metagenome

Library:

Name: Kalu_18-Q3-R12-55_NP

Instrument: PromethION

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 2.8M spots, 22.5G bases, 18.7Gb

Run	# of Spots	# of Bases	Size	Published
SRR11673973	2,843,709	22.5G	18.7Gb	2021-01-24

ID:: 10734905

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