U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX6454036: WGS of L. gasseri UMB2965
1 ILLUMINA (Illumina MiSeq) run: 434,684 spots, 111.9M bases, 59.4Mb downloads

Design: DNA extracted using Qiagen UltraClean Microbial Kit. Library preparation using Nextera kit. 250x2 paired-end reads.
Submitted by: Loyola University Chicago
Study: Female Urinary Microbiota Genome Sequencing
show Abstracthide Abstract
Recently, bacterial communities (microbiota) have been discovered in the female bladder. Thus, the “sterile urine” paradigm is no longer valid. In an effort to provide a comprehensive view of the newly discovered female urinary microbiota (FUM), we have established an Enhanced Quantitative Urine Culture (EQUC) protocol. EQUC isolates bacteria from 75-90% of urine samples deemed 'no growth' by the standard clinical microbiology urine culture method. We have begun to sequence and annotate the genomes of these isolated bacteria.
Sample:
SAMN12277457 • SRS5107113 • All experiments • All runs
Library:
Name: Lg2965
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 434,684 spots, 111.9M bases, 59.4Mb
Run# of Spots# of BasesSizePublished
SRR9695714434,684111.9M59.4Mb2019-07-17

ID:
8550370

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...