Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX479653: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322715' containing sample 'TKK_04_0066' from individual 'NL_066'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.5M spots, 698.3M bases, 318Mb downloads

UUID: 0990e459-55de-442f-8388-13d9a3f9f268

Design: Illumina sequencing of Mycobacterium tuberculosis TKK_04_0066 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - KRITH 2

PRJNA235475 • SRP039176 • All experiments • All runs

Sample:

SAMN02585965 • SRS565003 • All experiments • All runs

Organism: Mycobacterium tuberculosis TKK_04_0066

Library:

Name: Pond-322715

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 481206.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5EVG9

material_type: DNA:DNA Somatic

product_order: PDO-2814

product_part_number: P-MCV-0004

project: G58104

research_project: RP-114

root_sample_id: SM-4P5CN

sample_id: SM-5EVG9

work_request: 39951

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-26 09:39:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.5M spots, 698.3M bases, 318Mb

Run	# of Spots	# of Bases	Size	Published
SRR1180353	1,736,009	350.7M	159.2Mb	2014-03-01
SRR1180429	1,720,899	347.6M	158.8Mb	2014-03-01

ID:: 669087

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity