Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX479584: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322672' containing sample 'TKK_03_0112'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.4M spots, 892.9M bases, 403.2Mb downloads

UUID: ace323f3-9c71-4530-add3-a85c8ccef03f

Design: Illumina sequencing of Mycobacterium tuberculosis TKK_03_0112 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - KRITH 2

PRJNA235451 • SRP039142 • All experiments • All runs

Sample:

SAMN02585941 • SRS564964 • All experiments • All runs

Organism: Mycobacterium tuberculosis TKK_03_0112

Library:

Name: Pond-322672

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 481163.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5EVF1

material_type: DNA:DNA Somatic

product_order: PDO-2814

product_part_number: P-MCV-0004

project: G58080

research_project: RP-114

root_sample_id: SM-4P5BY

sample_id: SM-5EVF1

work_request: 39951

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-26 09:39:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.4M spots, 892.9M bases, 403.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1180280	2,199,485	444.3M	201.7Mb	2014-03-01
SRR1183095	2,221,051	448.7M	201.4Mb	2014-03-05

ID:: 669018

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Sequence Read Archive

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