Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473724: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320452' containing sample 'TB_RSA87' from individual '11444/0'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.4M spots, 1.1G bases, 597.9Mb downloads

UUID: e64e0b27-5a29-4822-bd58-20881a8c8f66

Design: Illumina sequencing of Mycobacterium tuberculosis TB_RSA87 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - MRC SA

PRJNA228081 • SRP036889 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis TB_RSA87

SAMN02403528 • SRS555232 • All experiments • All runs

Organism: Mycobacterium tuberculosis TB_RSA87

Library:

Name: Pond-320452

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 453834.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5818G

material_type: DNA:DNA Somatic

product_order: PDO-2551

product_part_number: P-MCV-0001

project: G54490

research_project: RP-114

root_sample_id: SM-4PMQP

sample_id: SM-5818G

work_request: 39310

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 13:50:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.4M spots, 1.1G bases, 597.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1173296	2,715,631	548.6M	298.8Mb	2014-02-20
SRR1173328	2,714,634	548.4M	299.1Mb	2014-02-20

ID:: 654214

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