Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX470763: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320434' containing sample 'TB_RSA107' from individual '11458/2'
2 ILLUMINA (Illumina HiSeq 2000) runs: 1.3M spots, 256.1M bases, 108.2Mb downloads

UUID: e98465c5-52fc-4c39-8592-fbf162f0f762

Design: Illumina sequencing of Mycobacterium tuberculosis TB_RSA107 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - MRC SA

PRJNA228101 • SRP037173 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis TB_RSA107

SAMN02403548 • SRS555524 • All experiments • All runs

Organism: Mycobacterium tuberculosis TB_RSA107

Library:

Name: Pond-320434

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 458697.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:59W5E

material_type: DNA:DNA Somatic

product_order: PDO-2551

product_part_number: P-MCV-0001

project: G54510

research_project: RP-114

root_sample_id: SM-4PNYO

sample_id: SM-59W5E

work_request: 39312

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-08 10:56:11.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 1.3M spots, 256.1M bases, 108.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1169199	639,119	129.1M	54.5Mb	2014-02-13
SRR1172233	628,740	127M	53.7Mb	2014-02-19

ID:: 651012

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