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SRX4548787: RNA-Seq of mus musculus: adult female spleen
1 ILLUMINA (Illumina HiSeq 3000) run: 41.9M spots, 2.1G bases, 842.1Mb downloads

Design: Column isolated DNaseI treated RNA, converted to cDNA using Oligod(T) and SuperScriptII (Invitrogen), second strand using NEB cDNA synthesis kit. Covaris sonicated to 250-300bp. Libraries prepared using Thruplex Rubicon DNA-seq library.
Submitted by: Universtiy of Bergen
Study: Evaluation of NKG2D and DAP10 knockout mice
show Abstracthide Abstract
NK cell activation depends on a change in the balance between signals from inhibitory and activating receptors. The threshold values at which changes in this equilibrium drive NK activation are thought to be set by inhibitory receptor engagement during development. Here, we elucidated how the activating receptor NKG2D controls NK cell responsiveness.We evaluated the differences between wild-type mice and knockout mice harbouring Klrk1-/- (NKG2D) or Tyrobp-/- (DAP10). We aimed to understand the impact from the loss of the NK cell activating receptor NKG2D or the associated DAP10 signalling protein has on determining overall activating signalling thresholds set during NK cell development.
Sample: Wild-type
SAMN09813435 • SRS3666050 • All experiments • All runs
Organism: Mus musculus
Library:
Name: WT3
Instrument: Illumina HiSeq 3000
Strategy: RNA-Seq
Source: GENOMIC
Selection: RT-PCR
Layout: SINGLE
Runs: 1 run, 41.9M spots, 2.1G bases, 842.1Mb
Run# of Spots# of BasesSizePublished
SRR768855941,871,2172.1G842.1Mb2018-08-13

ID:
6154969

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