strand-specific RNA sequencing of Ovis aries mammalian oviduct sample... - SRA

SRX4409424: strand-specific RNA sequencing of Ovis aries mammalian oviduct sample OAR_USU_Benz2616_OVI
1 ILLUMINA (Illumina HiSeq 2000) run: 45.4M spots, 9.2G bases, 5.5Gb downloads

Design: strand-specific RNA sequencing of Ovis aries mammalian oviduct sample OAR_USU_Benz2616_OVI

Submitted by: Baylor College of Medicine (BCM)

Study: Ovis aries Rambouillet Genome sequencing and assembly

PRJNA414087 • SRP125115 • All experiments • All runs

show Abstracthide Abstract

The data includes Pacific Biosciences long-read data for de novo contig assembly, Illumina short-read data for base-quality polishing, and Hi-C Illumina data for genomic scaffolding.

Sample: uterine tube (oviduct)

SAMEA104495006 • SRS3563059 • All experiments • All runs

Organism: Ovis aries

Library:

Name: RAMBKW.OVI-4081-TRI-1_1AMP

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: PolyA

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
Base Caller	1	NIL	Casava	1.8.3
Quality Scores	2	1	Casava	1.8.3

Runs: 1 run, 45.4M spots, 9.2G bases, 5.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR7543061	45,430,022	9.2G	5.5Gb	2018-07-19

ID:: 5991530

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity