Powassan virus and metagenomic sequencing reads from human clinical c... - SRA

SRX3104228: Powassan virus and metagenomic sequencing reads from human clinical cerebrospinal fluid sample
1 ILLUMINA (Illumina MiSeq) run: 4.6M spots, 1G bases, 507.9Mb downloads

Design: Merged bam file from three independent libraries POWV_M030T_CSF.l1 (sequenced on two separate MiSeq runs AVFHP.1 and AYYCK.1, two separate HiSeq runs BHCGN.1 and HC53H.1, and a third HiSeq run after hybrid capture HC53H.2), POWV_M030T_CSF.l2 (sequenced on three separate MiSeq runs AW5DT.1 AYCW9.1 and AYYCK.1.2, one HiSeq run HC53H.1.6, and a second HiSeq run after hybrid capture HC53H.2.9), and POWV_M030T.l3 (sequenced on one MiSeq run AYYCK.1.3, one HiSeq run HC53H.1.7, and one HiSeq run after hybrid capture HC53H.2). Libraries have been cleaned of human reads.

Submitted by: Broad Institute

Study: Powassan virus Genome sequencing and assembly

PRJNA398476 • SRP115707 • All experiments • All runs

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Partial Powassan virus genomes from clinical samples

Sample:

SAMN07510910 • SRS2439684 • All experiments • All runs

Organism: Powassan virus

Library:

Name: POWV_M030T_CSF_pooled

Instrument: Illumina MiSeq

Strategy: RNA-Seq