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SRX13451728: 191341
1 ILLUMINA (NextSeq 500) run: 34.2M spots, 10.3G bases, 4.1Gb downloads

Design: DNA was extracted using the DNeasy Plant Mini Kit (Qiagen, Valencia, CA, USA). Multiplexed genomic DNA libraries were created with the Nextera Flex platform (Illumina Inc., San Diego, CA, USA) and sequenced on a NextSeq500 (paired-end 2 x 150bp) by the Cornell Institute of Biotechnology Genomics Facility
Submitted by: Cornell University
Study: Tomato Breeding Line Resequencing - Early Blight Resistance Research
show Abstracthide Abstract
Recent and historical tomato (S. lycopersicum) breeding lines were sequenced in 2019 and 2020. These new sequences were used to fine-map disease resistance to early blight on tomato. The sequence data were analyzed using haplotype clustering in the associated publication, helping to clarify the location and ancestry of underlying local haplotypes. The breeding lines were bred by the USDA, Cornell University and/or The Ohio State University. Seed can be requested through the gene bank or by emailing Martha Mutschler-Chu (mam13@cornell.edu). Sequences were generated by the above institutions, and by the Boyce Thompson Institute, Ithaca NY.
Sample: 191341
SAMN24219821 • SRS11350772 • All experiments • All runs
Library:
Name: NEXTFLEX_191341
Instrument: NextSeq 500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 34.2M spots, 10.3G bases, 4.1Gb
Run# of Spots# of BasesSizePublished
SRR1727406234,183,27610.3G4.1Gb2022-02-01

ID:
18624779

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