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SRX001806: 454 sequencing of Castanea mollissima healthy stem 2 transcript fragment library
2 LS454 (454 GS FLX) runs: 259,859 spots, 67.2M bases, 158.5Mb downloads

Design: cDNA used for 454 library prepared from mRNA by random hexamer priming; 454 libraries prepared from sheared, capped cDNA without cloning.
Submitted by: Clemson University Genomics Institute (CUGI)
Study: Genomic Tool Development for the Fagaceae
show Abstracthide Abstract
The family of forest trees (the Fagaceae) that includes the chestnuts, oaks and beeches, dominates the hardwood forests of the northern hemisphere. These tree species have significant economic and ecological value. We will study the chestnut genome as a model for the Fagaceae and compare it to oak, beech and other forest trees. A major goal is to advance the breeding of an American chestnut resistant to Chestnut Blight Disease. Chestnut Blight Disease, caused by Cryphonectria parasitica, created one of the greatest ecological disasters in the history of the United States.
Sample: Generic sample from Castanea mollissima
SAMN00000767 • SRS001228 • All experiments • All runs
Library:
Name: Chinese chestnut healthy stem 2
Instrument: 454 GS FLX
Strategy: EST
Source: TRANSCRIPTOMIC
Selection: RANDOM PCR
Layout: SINGLE
Spot descriptor:
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Runs: 2 runs, 259,859 spots, 67.2M bases, 158.5Mb
Run# of Spots# of BasesSizePublished
SRR00630374,28119.1M45.4Mb2008-11-14
SRR006304185,57848.1M113.1Mb2008-11-14

ID:
1807

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