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SRX1538262: GSM2042682: sham spinal cord b; Danio rerio; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 20M spots, 976.6M bases, 362.3Mb downloads

Submitted by: NCBI (GEO)
Study: RNA sequencing of adult zebrafish spinal cord
show Abstracthide Abstract
The goal of this study is to determine gene expression changes in the adult zebrafish spinal cord at 2 weeks after complete transection. Overall design: 2 samples were analyzed in duplicates: sham injured spinal cord and transected spinal cord at 2 weeks post-injury
Sample: sham spinal cord b
SAMN04430450 • SRS1254844 • All experiments • All runs
Organism: Danio rerio
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Selection: cDNA
Layout: SINGLE
Construction protocol: RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser. TruSeq libraries were constructed according to manufacturer's instructions
Experiment attributes:
GEO Accession: GSM2042682
Runs: 1 run, 20M spots, 976.6M bases, 362.3Mb
Run# of Spots# of BasesSizePublished


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