U.S. flag

An official website of the United States government


Send to:

Choose Destination

SRX9486422: Hi-C of Caranx ignobilis: adult blood
1 ILLUMINA (Illumina HiSeq 2500) run: 169.1M spots, 80.9G bases, 37.1Gb downloads

Design: Blood was preserved in EDTA and shipped to sequencing center on dry ice. Following the "Omni-C Proximity Ligation Assay Protocol version 1.0", Dovetail Genomics Omni-C kit was used to prepare for Illumina Paired-end sequencing. Adapters were provided by Integrated DNA Technologies, and sequencing proceeded in Rapid Run mode for 250 cycles in one lane on an Illumina Hi-Seq 2500.
Submitted by: Brigham Young University
Study: Caranx ignobilis isolate:HI-2019 Genome sequencing and assembly
show Abstracthide Abstract
The genome was sequenced with long (Pacific Biosciences) reads. RNA-seq reads were generated from eight tissues for transcript assembly and annotation. Samples were taken from one individual from the Pacific Ocean near Hawai'i, USA.
Sample: Caranx ignobilis Blood
SAMN16629462 • SRS7695768 • All experiments • All runs
Name: Cign_Blood_OmniC
Instrument: Illumina HiSeq 2500
Strategy: Hi-C
Selection: DNase
Layout: PAIRED
Runs: 1 run, 169.1M spots, 80.9G bases, 37.1Gb
Run# of Spots# of BasesSizePublished


Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...