Hi-C of Caranx ignobilis: adult blood - SRA

SRX9486422: Hi-C of Caranx ignobilis: adult blood
1 ILLUMINA (Illumina HiSeq 2500) run: 169.1M spots, 80.9G bases, 37.1Gb downloads

Design: Blood was preserved in EDTA and shipped to sequencing center on dry ice. Following the "Omni-C Proximity Ligation Assay Protocol version 1.0", Dovetail Genomics Omni-C kit was used to prepare for Illumina Paired-end sequencing. Adapters were provided by Integrated DNA Technologies, and sequencing proceeded in Rapid Run mode for 250 cycles in one lane on an Illumina Hi-Seq 2500.

Submitted by: Brigham Young University

Study: Caranx ignobilis isolate:HI-2019 Genome sequencing and assembly

PRJNA670456 • SRP292327 • All experiments • All runs

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The genome was sequenced with long (Pacific Biosciences) reads. RNA-seq reads were generated from eight tissues for transcript assembly and annotation. Samples were taken from one individual from the Pacific Ocean near Hawai'i, USA.

Sample: Caranx ignobilis Blood

SAMN16629462 • SRS7695768 • All experiments • All runs

Organism: Caranx ignobilis

Library:

Name: Cign_Blood_OmniC

Instrument: Illumina HiSeq 2500

Strategy: Hi-C

Source: GENOMIC

Selection: DNase

Layout: PAIRED

Runs: 1 run, 169.1M spots, 80.9G bases, 37.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR13036356	169,109,783	80.9G	37.1Gb	2021-08-23

ID:: 12393686

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