Whole genome sequencing of Bugula neritina: adult colonies - SRA

SRX7783016: Whole genome sequencing of Bugula neritina: adult colonies
1 PACBIO_SMRT (PacBio RS II) run: 1.1M spots, 9.2G bases, 5.9Gb downloads

Design: Two adult colonies of B. neritina were collected by hand from floating docks in August 2015 from the public floating docks in Oyster, Virginia, U. S. A. (GPS coordinates 37.288 N, -75.923 W) and immediately preserved in RNAlater and stored at -20oC.Genomic DNA extraction included a polysaccharide removal step. High throughput DNA sequencing was performed using eight 20 kb insert libraries on the Pacific Biosciences RS-II instrument using P6-C5 SMRT cells at the University of Florida ICBR.

Submitted by: Saint-Petersburg State University

Study: Bugula neritina isolate:Kwan_BN1 Genome sequencing and assembly

PRJNA498596 • SRP250375 • All experiments • All runs

show Abstracthide Abstract

Many animal phyla have no representatives within the catalog of whole metazoan genome sequences. This dataset fills in one gap with a complete genome of Bugula neritina (phylum Bryozoa). This species stands prominently outside ecology and into biomedical realms due to its production of potentially therapeutic bryostatins. Here we present a draft assembly of the B.neritina genome obtained from PacBio and Illumina HiSeq data, as well as genes and proteins predicted de novo and verified using transcriptome data.

Sample: Bugula neritina PacBio sequencing

SAMN10319711 • SRS6199687 • All experiments • All runs

Organism: Bugula neritina

Library:

Name: Bner_adult_01

Instrument: PacBio RS II

Strategy: WGS

Source: GENOMIC

Selection: unspecified

Layout: SINGLE

Runs: 1 run, 1.1M spots, 9.2G bases, 5.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR11146886	1,127,494	9.2G	5.9Gb	2020-08-18

ID:: 10161244

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