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ERX386651: Illumina HiSeq 1000 paired end sequencing
1 ILLUMINA (Illumina HiSeq 1000) run: 2.5M spots, 499.5M bases, 242.7Mb downloads

Submitted by: MBL
Study: Metagenomes and metatranscriptomes from the diffuse hydrothermal vents of Axial Seamount, 2011-2012
show Abstracthide Abstract
This projects explores the functional diversity and activity of rocky subseafloor microbial communities in hydrothermal vent systems. Samples were collected in 2011 and 2012 from a number of low temperature diffuse fluid vents at Axial seamount, located in the northeast Pacific Ocean. Shotgun metagenomics and metatranscriptomics were performed on four diffuse vent samples. Previous work at this site determined the taxonomic structure and distribution of microbial communities in venting fluids, but the contribution and mechanisms of the different redox driven metabolisms and the impact these reactions have on vent chemical signatures have not been fully characterized. This study helps to determine the genetic potential and expression patterns of the largely uncharacterized subseafloor microbial community and shows how these patterns change across the complicated biogeochemical gradients of hydrothermal vent systems.
Sample: Axial seamount metagenomes 2011-2012
SAMEA2341965 • ERS399636 • All experiments • All runs
Organism: metagenome
Library:
Name: Axial_FS857_DNA_Anemone
Instrument: Illumina HiSeq 1000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
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Runs: 1 run, 2.5M spots, 499.5M bases, 242.7Mb
Run# of Spots# of BasesSizePublished
ERR4203582,472,558499.5M242.7Mb2014-05-14

ID:
738113

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