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DRX479879: Sequel II sequencing of SAMD00634149
2 PACBIO_SMRT (Sequel II) runs: 13.2M spots, 272.1G bases, 63.9Gb downloads

Submitted by: TITECH
Study: Whole genome sequences of the Tokunoshima spiny rat, Tokudaia tokunoshimensis
show Abstracthide Abstract
The Tokunoshima spiny rat, Tokudaia tokunoshimensis, has highly unique sex chromosomes and a sex-determining mechanism. The sex chromosome constitution of this species is XO/XO, which is due to the absence of the Y chromosome similar to its closely related Amami spiny rat, T. osimensis. This species also lacks the SRY gene, which acts as the sex-determining gene in eutherian mammals. Therefore, we conducted whole genome sequencing and de novo assembly analysis for two aims: first, to utilize the information for the research of sex-determining mechanism and evolution of the Y chromosome, and second, to reserve the information as an important resource.
Sample: Whole genome sequences of TTO
SAMD00634149 • DRS325066 • All experiments • All runs
Name: PacBio
Instrument: Sequel II
Strategy: WGS
Selection: RANDOM
Layout: SINGLE
Construction protocol:
Runs: 2 runs, 13.2M spots, 272.1G bases, 63.9Gb
Run# of Spots# of BasesSizePublished


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