Trametes gallica transcriptome - SRA

SRX796488: Trametes gallica transcriptome
1 ILLUMINA (Illumina HiSeq 2000) run: 6.6M spots, 1.2G bases, 741.2Mb downloads

Design: The fungal strain of Trametes gallica used in this study were activated on potato dextrose agar (PDA) plate and then inoculated cultured statically in 27 kinds of liquid media and cultured statically at 28 ℃ about 10d.Total RNAs were extracted from each sample by using the Trizol Reagent (Invitrogen, USA), and treated with DNase I (Fermentas, USA) according to the manufacturer’s instructions. RNA concentrations were measured with Qubit fluorometer (Invitrogen, USA).Then the paired-end cDNA library was prepared with an insert size of 200 bp and submitted to Illumina Hiseq2000 platform for sequencing at Beijing Genomics Institute (BGI)-Shenzhen, Shenzhen, China.

Submitted by: Sichuan University

Study: Coriolopsis gallica strain:HTC Transcriptome or Gene expression

PRJNA263488 • SRP050574 • All experiments • All runs

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The goal of this project is to identify Trametes gallica transcripts using Next Generation Sequencing

Sample: The fungal strain used in our project was Trametes gallica HTC. The fungal strain of Trametes gallica were activated on potato dextrose agar (PDA) plate and then inoculated cultured statically in 27 kinds of liquid media and cultured statically at 28 about 10d.

SAMN03217744 • SRS779864 • All experiments • All runs

Organism: Coriolopsis gallica

Library:

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: unspecified

Layout: PAIRED

Spot descriptor:

1 forward91 reverse

Runs: 1 run, 6.6M spots, 1.2G bases, 741.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1693773	6,637,231	1.2G	741.2Mb	2014-12-06

ID:: 1140044

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