Targeted sequencing of Senna malaspinae - SRA

SRX22463837: Targeted sequencing of Senna malaspinae
1 ILLUMINA (Illumina HiSeq 3000) run: 99,637 spots, 29.9M bases, 13.6Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 3

PRJNA1021620 • SRP471047 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Senna malaspinae

SAMN37565603 • SRS19477832 • All experiments • All runs

Organism: Senna malaspinae

Library:

Name: 2070f60d-f4d8-43d0-8352-c31b94035b8c

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 99,637 spots, 29.9M bases, 13.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR26765370	99,637	29.9M	13.6Mb	2023-11-09

ID:: 30449626

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