Targeted sequencing of Chamaecrista wallichiana - SRA

SRX22464853: Targeted sequencing of Chamaecrista wallichiana
1 ILLUMINA (Illumina HiSeq 3000) run: 1.8M spots, 544M bases, 215.9Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 2

PRJNA1021608 • SRP471051 • All experiments • All runs

show Abstracthide Abstract

Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Chamaecrista wallichiana

SAMN37564185 • SRS19478670 • All experiments • All runs

Organism: Chamaecrista wallichiana

Library:

Name: 1e8e49d1-6a08-40c1-8534-b66f19301c23

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 1.8M spots, 544M bases, 215.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR26766226	1,813,402	544M	215.9Mb	2023-11-09

ID:: 30450642

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity