Mapped reads for uncultivated Lautropia bacterium UBA9289 genome reco... - SRA

SRX3575841: Mapped reads for uncultivated Lautropia bacterium UBA9289 genome recovered from SRX330942
1 ILLUMINA (Illumina Genome Analyzer II) run: 150,367 spots, 24.3M bases, 13.7Mb downloads

Design: Reads from SRX330942 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9289 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

show Abstracthide Abstract

Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Lautropia bacterium UBA9289 genome recovered from SRX330942

SAMN08017458 • SRS2845723 • All experiments • All runs

Organism: Lautropia sp.

Library:

Name: UBA9289_library

Instrument: Illumina Genome Analyzer II

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 150,367 spots, 24.3M bases, 13.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR6486056	150,367	24.3M	13.7Mb	2018-02-23

ID:: 4961343

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Sequence Read Archive

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