Targeted sequencing of Acacia wanyu - SRA

SRX22452689: Targeted sequencing of Acacia wanyu
1 ILLUMINA (Illumina HiSeq 3000) run: 1.7M spots, 498.4M bases, 192Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 4

PRJNA1022015 • SRP471008 • All experiments • All runs

show Abstracthide Abstract

Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Acacia wanyu

SAMN37578728 • SRS19466720 • All experiments • All runs

Organism: Acacia wanyu

Library:

Name: 02846526-4c53-4b3b-8a60-cfed1e03b584

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 1.7M spots, 498.4M bases, 192Mb

Run	# of Spots	# of Bases	Size	Published
SRR26754161	1,661,395	498.4M	192Mb	2023-11-09

ID:: 30438359

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity