Whole genome shotgun sequencing of Salmonella enterica subsp. enteric... - SRA

SRX337742: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Agona str. SA-5 by 454 GS FLX
1 LS454 (454 GS FLX) run: 211,607 spots, 107.4M bases, 241.3Mb downloads

Design: 454 deep shotgun sequencing of cultured isolate.

Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)

Study: Salmonella enterica subsp. enterica serovar Agona str. SA-5 genome sequencing

PRJNA65253 • SRP029031 • All experiments • All runs

Sample: Pathogen bacterial, environmental sample from Salmonella enterica subsp. enterica serovar Agona str. SA-5

SAMN01816137 • SRS472148 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Agona str. SA-5

Library:

Name: Salmonella enterica str. CFSAN000505_01 shotgun

Instrument: 454 GS FLX

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Construction protocol: A Roche 454 GS FLX Titanium fragment library was created for Salmonella enterica str. CFSAN000505_01.

Spot descriptor:

5 forward

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	454 Data Acquisition	2.8

Runs: 1 run, 211,607 spots, 107.4M bases, 241.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR955186	211,607	107.4M	241.3Mb	2014-08-16

ID:: 475205

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