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SRX6935378: GSM4104632: NB69 CMYC ChIP-Seq; Homo sapiens; ChIP-Seq
1 ILLUMINA (NextSeq 500) run: 36.9M spots, 2.8G bases, 1,013.7Mb downloads

Submitted by: NCBI (GEO)
Study: MYCN and MYC ChIP-Seq profiling in neuroblastoma cell lines
show Abstracthide Abstract
MYCN and MYC profiling in neuroblastoma cell lines Overall design: Here, we provide MYCN ChIP-Seq for three neuroblastoma MYCN-amplified and one non-amplified (negative control) cell lines and MYC ChIP-Seq for one MYCN-amplified and three non-amplified cell lines.
Sample: NB69 CMYC ChIP-Seq
SAMN12889051 • SRS5465387 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: NextSeq 500
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Construction protocol: Cells were crosslinked, flash frozen, and sent to Active Motif. According to Active Motif protocol, cells were lysed, sonicated, and then DNA-protein complexes were isolated with antibodies. Samples were reverse-crosslinked and DNA was purified. Illumina libraries were prepared by Active Motif using standard consecutive enzymatic steps of end-polishing, dA-addition, and adaptor ligation. After 15 cycles of PCR amplification, the resulting DNA libraries were quantified and sequenced on Illumina NextSeq 500.
Experiment attributes:
GEO Accession: GSM4104632
Links:
Runs: 1 run, 36.9M spots, 2.8G bases, 1,013.7Mb
Run# of Spots# of BasesSizePublished
SRR1021569836,915,2402.8G1,013.7Mb2019-11-06

ID:
9126945

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