U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX1161172: GSM1858624: untreated rep#1 FoxA1 ChIP-seq GH917; Homo sapiens; ChIP-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 32.8M spots, 1.6G bases, 719.7Mb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Characterization of ER, GR, and FoxA1 binding patterns in breast cancer cells treated with either Dex or E2
show Abstracthide Abstract
The estrogen receptor (ER), glucocorticoid receptor (GR), and forkhead box protein 1 (FoxA1) are significant factors in breast cancer progression. FoxA1 is well-established as a pioneer factor for steroid receptor recruitment to chromatin. Here we show that ER and GR have the ability to alter the genomic response of FoxA1 to specific binding sites within the genome. These findings alter the classical understood mechanism of FoxA1 establishing a dynamic transcription factor that can be regulated by hormones. Overall design: We examined the ER and GR mediated affects on FoxA1 binding patterms
Sample: untreated rep#1 FoxA1 ChIP-seq GH917
SAMN04004019 • SRS1042204 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 2000
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Construction protocol: Lysates were clarified from sonicated nuclei and GR/DNA, ER/DNA, of FoxA1/DNA complexes were isolated with antibody.
Experiment attributes:
GEO Accession: GSM1858624
Links:
Runs: 1 run, 32.8M spots, 1.6G bases, 719.7Mb
Run# of Spots# of BasesSizePublished
SRR217697532,815,0411.6G719.7Mb2016-04-10

ID:
1687943

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...