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SRX1078581: RNA-seq of Mollivirus transcripts during infection of Acanthamoeba castellanii cells
3 ILLUMINA (Illumina HiSeq 2000) runs: 95.7M spots, 18.6G bases, 8.4Gb downloads

Submitted by: Centre National de la Recherche Scientifique - Information Genomique et Structurale (CNRS-IGS)
Study: Mollivirus sibericum Map
show Abstracthide Abstract
Annotation of the genes of Mollivirus sibericum, a giant virus recovered from 30000 year old permafrost sample infecting Acanthamoeba castellanii. RNA-seq transcriptome data of Mollivirus polyA+ mRNAs was sequenced and mapped to the genomic sequence.
Sample:
SAMN03835271 • SRS977046 • All experiments • All runs
Library:
Name: Mollivirus RNA-seq
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: VIRAL RNA
Selection: cDNA
Layout: PAIRED
Spot descriptor:
forward102  reverse

Pipeline: show...hide...
ProgramVersion
Tophat2.0.12
Runs: 3 runs, 95.7M spots, 18.6G bases, 8.4Gb
Run# of Spots# of BasesSizePublished
SRR20841238,516,5241.7G763.9Mb2015-07-27
SRR210326737,075,2017.2G3.3Gb2015-07-27
SRR210326850,082,6929.7G4.4Gb2015-07-27

ID:
1579927

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