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SRX873718: Whole Genome Sequencing of Salinispora pacifica CNY703
1 ILLUMINA (Illumina HiSeq 2000) run: 4.2M spots, 1.3G bases, 737.4Mb downloads

Submitted by: DOE JOINT GENOME INSTITUTE (JGI)
Study: Salinispora pacifica CNY703 Genome sequencing
show Abstracthide Abstract
Multiplexed sequencing for secondary metabolite discovery: the goal of this project is to generate draft genome sequences for 144 or more cultured marine actinomycetes. The focus is on the genus Salinispora, which has proven to be a rich source of unusual secondary metabolites. Multiple strains derived from different locations will provide opportunities to assess the ¿secondary metabolome¿ of a well-defined bacterial lineage and to better understand pathway evolution and how it generates structural complexity. This project provides a unique opportunity to apply genome-mining approaches to natural product discovery and to use population genomics to explore fundamental questions related to the ecology and evolution of bacteria.
Sample: Salinispora pacifica CNY703
SAMN02745360 • SRS843614 • All experiments • All runs
Library:
Name: NWHN
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
forward151  reverse

Runs: 1 run, 4.2M spots, 1.3G bases, 737.4Mb
Run# of Spots# of BasesSizePublished
SRR17995674,209,5891.3G737.4Mb2015-02-20

ID:
1251509

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